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Cellosaurus DJM-1 (CVCL_1172)

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Cell line name DJM-1
Synonyms DJM1
Accession CVCL_1172
Resource Identification Initiative To cite this cell line use: DJM-1 (RRID:CVCL_1172)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Part of: COSMIC cell lines project.
Population: Japanese.
Microsatellite instability: Stable (MSS) (Sanger).
Omics: Genomics; DNA methylation analysis.
Omics: Genomics; Whole exome sequencing.
Omics: Phenotyping; Drug screening.
Omics: Proteomics; Quantitative.
Omics: Transcriptomics; Microarray.
Omics: Variations; SNP array analysis.
Derived from site: In situ; Skin; UBERON=UBERON_0002097.
Sequence variations
  • Mutation; HGNC; HGNC:6770; SMAD4; Simple; p.Ser144Ter (c.431C>G); Zygosity=Homozygous (Cosmic-CLP=906841; DepMap=ACH-002100).
  • Mutation; HGNC; HGNC:11998; TP53; Simple; p.Gly266Val (c.797G>T); ClinVar=VCV000233303; Zygosity=Heterozygous (Cosmic-CLP=906841; DepMap=ACH-002100).
Genome ancestry Source: PubMed=30894373

Origin% genome
African0
Native American0
East Asian, North79.62
East Asian, South19.44
South Asian0.93
European, North0
European, South0
Disease Skin squamous cell carcinoma (NCIt: C4819)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_8157 (BSCC-93)
Sex of cell Female
Age at sampling 87Y
Category Cancer cell line
STR profile Source(s): Cosmic-CLP=906841; RCB=RCB0736

Markers:
AmelogeninX
CSF1PO11,12
D5S81810,13
D7S8207,8
D13S3178
D16S53910
TH016
TPOX8,9
vWA14,17

Run an STR similarity search on this cell line
Publications

PubMed=2439611; DOI=10.1111/1523-1747.ep12470554
Yasuo Kitajima, Shunichiro Inoue, Hideo Yaoita;
Effects of pemphigus antibody on the regeneration of cell-cell contact in keratinocyte cultures grown in low to normal Ca++ concentration.
J. Invest. Dermatol. 89:167-171(1987)

PubMed=1919059; DOI=10.1111/1523-1747.ep12491818
Hiroshi Katayama, Seiichi Kitagawa, Jun-ichi Masuyama, Hideo Yaoita;
Polymorphonuclear leukocyte-induced detachment of cultured epidermal carcinoma cells from the substratum.
J. Invest. Dermatol. 97:949-952(1991)

PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113
Graham Robert Bignell, Christopher D. Greenman, Helen R. Davies, Adam P. Butler, Sarah Edkins, Jenny M. Andrews, Gemma Buck, Lina Chen, David Beare, Calli Latimer, Sara Widaa, Jonathan Hinton, Ciara Fahey ...Show all 22 authors... , Bei-Yuan Fu, Sajani Swamy, Gillian L. Dalgliesh, Bin Tean Teh, Panos Deloukas, Feng-Tang Yang, Peter J. Campbell, P. Andrew Futreal, Michael Rudolf Stratton; Show fewer authors
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469
Francesco Iorio, Theo A. Knijnenburg, Daniel J. Vis, Graham Robert Bignell, Michael Patrick Menden, Michael Schubert, Nanne Aben, Emanuel Goncalves, Syd Barthorpe, Howard Lightfoot, Thomas Cokelaer, Patricia Greninger, Ewald van Dyk ...Show all 39 authors... , Han Chang, Heshani de Silva, Holger Heyn, Xian-Ming Deng, Regina K. Egan, Qing-Song Liu, Tatiana Mironenko, Xeni Mitropoulos, Laura Richardson, Jin-Hua Wang, Ting-Hu Zhang, Sebastian Moran, Sergi Sayols, Maryam Soleimani, David Tamborero, Nuria Lopez-Bigas, Petra Ross-Macdonald, Manel Esteller, Nathanael S. Gray, Daniel Arie Haber, Michael Rudolf Stratton, Cyril Henri Benes, Lodewyk F.A. Wessels, Julio Saez-Rodriguez, Ultan McDermott, Mathew J. Garnett; Show fewer authors
A landscape of pharmacogenomic interactions in cancer.
Cell 166:740-754(2016)

PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675
Julie Dutil, Zhi-Hua Chen, Alvaro N.A. Monteiro, Jamie K. Teer, Steven A. Eschrich;
An interactive resource to probe genetic diversity and estimated ancestry in cancer cell lines.
Cancer Res. 79:1263-1273(2019)

PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775
Emanuel Goncalves, Rebecca C. Poulos, Zhao-Xiang Cai, Syd Barthorpe, Srikanth S. Manda, Natasha Lucas, Alexandra Beck, Daniel Bucio-Noble, Michael Dausmann, Caitlin Hall, Michael Hecker, Jennifer Koh, Howard Lightfoot ...Show all 32 authors... , Sadia Mahboob, Iman Mali, James Morris, Laura Richardson, Akila J. Seneviratne, Rebecca Shepherd, Erin Sykes, Frances Thomas, Sara Valentini, Steven G. Williams, Yang-Xiu Wu, Dylan Xavier, Karen L. MacKenzie, Peter G. Hains, Brett Tully, Phillip James Robinson, Qing Zhong, Mathew J. Garnett, Roger Robert Reddel; Show fewer authors
Pan-cancer proteomic map of 949 human cell lines.
Cancer Cell 40:835-849.e8(2022)

Cross-references
Cell line collections (Providers) BCRJ; 0375
RCB; RCB0736
Cell line databases/resources CLO; CLO_0050680
cancercelllines; CVCL_1172
Cell_Model_Passport; SIDM00281
Cosmic-CLP; 906841
DepMap; ACH-002100
LINCS_LDP; LCL-1405
Biological sample resources BioSample; SAMN03472223
Chemistry resources ChEMBL-Cells; CHEMBL3308190
ChEMBL-Targets; CHEMBL2366264
GDSC; 906841
PharmacoDB; DJM1_292_2019
PubChem_Cell_line; CVCL_1172
Encyclopedic resources Wikidata; Q54831104
Gene expression databases ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-3610
FANTOM5_SSTAR; 10412-106B7
GEO; GSM1669733
Polymorphism and mutation databases Cosmic; 906841
IARC_TP53; 21302
Proteomic databases PRIDE; PXD030304
Sequence databases EGA; EGAS00001000978
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number36