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Cellosaurus BOKU (CVCL_1089)

[Text version]
Cell line name BOKU
Synonyms Boku
Accession CVCL_1089
Resource Identification Initiative To cite this cell line use: BOKU (RRID:CVCL_1089)
Comments Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE).
Population: Japanese.
Doubling time: ~3 days (Note=Lot 11122010) (JCRB=IFO50323).
Transformant: NCBI_TaxID; 333760; Human papillomavirus type 16 (HPV16).
Omics: DNA methylation analysis.
Omics: SNP array analysis.
Omics: Transcriptome analysis by microarray.
Derived from site: In situ; Uterus, cervix; UBERON=UBERON_0000002.
Disease Human papillomavirus-related cervical squamous cell carcinoma (NCIt: C27676)
Squamous cell carcinoma of the cervix uteri (ORDO: Orphanet_213767)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Female
Age at sampling Age unspecified
Category Cancer cell line
STR profile Source(s): DepMap; JCRB; PubMed=25877200

Markers:
AmelogeninX
CSF1PO10,12
D2S133823
D3S135815
D5S8188,11
D7S8208,12
D8S117913,14
D13S3179
D16S5399,12
D18S5114
D19S43313.2,14
D21S1129,30
FGA21.2,24
Penta D12,13
Penta E10,18
TH018,9
TPOX11
vWA17,21

Run an STR similarity search on this cell line
Publications

CLPUB00481
Kuno H., Yoshida T.
Detection of human papillomavirus types 16, 18, and 33 in cell lines derived from human genital organs by polymerase chain reaction.
Res. Commun. Inst. Ferment. Osaka 18:6-12(1997)

PubMed=20164919; DOI=10.1038/nature08768
Bignell G.R., Greenman C.D., Davies H., Butler A.P., Edkins S., Andrews J.M., Buck G., Chen L., Beare D., Latimer C., Widaa S., Hinton J., Fahey C., Fu B.-Y., Swamy S., Dalgliesh G.L., Teh B.T., Deloukas P., Yang F.-T., Campbell P.J., Futreal P.A., Stratton M.R.
Signatures of mutation and selection in the cancer genome.
Nature 463:893-898(2010)

PubMed=25877200; DOI=10.1038/nature14397
Yu M., Selvaraj S.K., Liang-Chu M.M.Y., Aghajani S., Busse M., Yuan J., Lee G., Peale F.V., Klijn C., Bourgon R., Kaminker J.S., Neve R.M.
A resource for cell line authentication, annotation and quality control.
Nature 520:307-311(2015)

Cross-references
Cell line collections (Providers) JCRB; IFO50323
Cell line databases/resources CLO; CLO_0009925
cancercelllines; CVCL_1089
Cell_Model_Passport; SIDM00073
DepMap; ACH-001451
LINCS_LDP; LCL-1545
Biological sample resources BioSample; SAMN03470920
Chemistry resources ChEMBL-Cells; CHEMBL3308160
ChEMBL-Targets; CHEMBL2366109
GDSC; 753536
PharmacoDB; BOKU_105_2019
PubChem_Cell_line; CVCL_1089
Encyclopedic resources Wikidata; Q54797924
Gene expression databases ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-3610
GEO; GSM1669626
Polymorphism and mutation databases Cosmic; 753536
IARC_TP53; 27686
Sequence databases EGA; EGAS00001000978
Entry history
Entry creation04-Apr-2012
Last entry update05-Oct-2023
Version number29