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Cellosaurus GM19226 (CVCL_0U54)

[Text version]
Cell line name GM19226
Accession CVCL_0U54
Resource Identification Initiative To cite this cell line use: GM19226 (RRID:CVCL_0U54)
Comments Part of: International Genome Sample Resource (1000 genomes project) cell lines.
Population: African; Yoruba in Ibadan, Nigeria (YRI).
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Genomics; Whole genome sequencing.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling Age unspecified
Category Transformed cell line
STR profile Source(s): PubMed=25877200

Markers:
AmelogeninX
CSF1PO12,13
D2S133821,22
D3S135816,17
D5S8189,12
D7S8209,10
D8S117912,13
D13S31712,13
D16S5399,11
D18S5115,20
D19S43314,15
D21S1128,32.2
FGA21,23
Penta D12
Penta E8
TH017
TPOX6
vWA14,17

Run an STR similarity search on this cell line
Publications

PubMed=25877200; DOI=10.1038/nature14397
Ma-Mie Yu, Suresh K. Selvaraj, May M.Y. Liang-Chu, Sahar Aghajani, Matthew Busse, Jean Yuan, Genee Lee, Franklin V. Peale, Christiaan Klijn, Richard Bourgon, Joshua S. Kaminker, Richard M. Neve;
A resource for cell line authentication, annotation and quality control.
Nature 520:307-311(2015)

PubMed=26621101; DOI=10.1016/j.jmoldx.2015.08.005; PMCID=PMC4695224
Victoria M. Pratt, Robin E. Everts, Praful Aggarwal, Brittany N. Beyer, Ulrich Broeckel, Ruth Epstein-Baak, Paul Hujsak, Ruth Kornreich, Jun Liao, Rachel Lorier, Stuart A. Scott ...Show all 15 authors... , Ching-Ying Huang Smith, Lorraine H. Toji, Amy Turner, Lisa V. Kalman; Show fewer authors
Characterization of 137 genomic DNA reference materials for 28 pharmacogenetic genes: a GeT-RM collaborative project.
J. Mol. Diagn. 18:109-123(2016)

PubMed=31401124; DOI=10.1016/j.jmoldx.2019.06.007; PMCID=PMC6854474
Andrea Gaedigk, Amy Turner, Robin E. Everts, Stuart A. Scott, Praful Aggarwal, Ulrich Broeckel, Gwendolyn A. McMillin, Roberta Melis, Erin C. Boone, Victoria M. Pratt, Lisa V. Kalman;
Characterization of reference materials for genetic testing of CYP2D6 alleles: a GeT-RM collaborative project.
J. Mol. Diagn. 21:1034-1052(2019)

Cross-references
Cell line collections (Providers) Coriell; GM19226
Cell line databases/resources CLO; CLO_0027283
Biological sample resources BioSample; SAMN03470974
IGSR; NA19226
Encyclopedic resources Wikidata; Q54850315
Entry history
Entry creation08-Jul-2015
Last entry update10-Apr-2025
Version number17