| Cell line name |
NZM087 |
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| Synonyms |
NZM87 |
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| Accession |
CVCL_0D47 |
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| Resource Identification Initiative |
To cite this cell line use: NZM087 (RRID:CVCL_0D47) |
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| Comments |
Omics: Genomics; Whole exome sequencing.
Omics: Transcriptomics; RNAseq. |
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| Sequence variations |
- Mutation; HGNC; HGNC:1097; BRAF; Simple; p.Val600Glu (c.1799T>A); ClinVar=VCV000013961; Zygosity=Homozygous (PubMed=32567790).
- Mutation; HGNC; HGNC:7765; NF1; Simple; p.His1170Tyr; Zygosity=Unspecified (PubMed=32567790).
- Mutation; HGNC; HGNC:8803; PDGFRA; Simple; p.Glu996Lys (c.2986G>A); ClinVar=VCV000822435; Zygosity=Heterozygous (PubMed=32567790).
- Mutation; HGNC; HGNC:11730; TERT; Simple; c.1-146C>T (c.250C>T) (C250T); Zygosity=Unspecified; Note=In promoter (PubMed=32567790).
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| HLA typing |
Source: PubMed=32567790
| Class I | | HLA-A | A*02:01,03:01 | | HLA-B | B*07:02,14:02 | | HLA-C | C*07:02,08:02 |
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| Disease |
Melanoma (NCIt: C3224) |
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| Species of origin |
Homo sapiens (Human)
(NCBI Taxonomy: 9606) |
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| Sex of cell |
Male |
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| Age at sampling |
Age unspecified |
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| Category |
Cancer cell line |
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| STR profile |
Source(s): PubMed=32567790
Markers:| Amelogenin | X,Y |
| CSF1PO | 11,13 |
| D2S1338 | 20,24 |
| D3S1358 | 14,15 |
| D5S818 | 11 |
| D7S820 | 10,12 |
| D8S1179 | 11,13 |
| D13S317 | 11 |
| D16S539 | 11,13 |
| D18S51 | 16,17 |
| D19S433 | 12,13 |
| D21S11 | 30,32.2 |
| FGA | 23,25 |
| TH01 | 6,8 |
| TPOX | 8 |
| vWA | 19,20 |
Run an STR similarity search on this cell line |
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| Publications | PubMed=32567790; DOI=10.1111/pcmr.12908; PMCID=PMC7818249
Khanh B. Tran, Gregory Gimenez, Peter Tsai, Sharada Kolekar, Euan J. Rodger, Aniruddha Chatterjee, Anower Jabed, Jen-Hsing Shih, Wayne R. Joseph, Elaine S. Marshall, Qian Wang ...Show all 15 authors... , Cristin Gregor Print, Michael R. Eccles, Bruce Charles Baguley, Peter R. Shepherd; Show fewer authors
Genomic and signalling pathway characterization of the NZM panel of melanoma cell lines: a valuable model for studying the impact of genetic diversity in melanoma.
Pigment Cell Melanoma Res. 34:136-143(2021) |
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| Cross-references |
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| Cell line databases/resources |
cancercelllines; CVCL_0D47
|
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| Biological sample resources |
BioSample; SAMN14558354
|
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| Encyclopedic resources |
Wikidata; Q54931629
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| Entry history |
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| Entry creation | 10-Apr-2015 |
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| Last entry update | 14-Aug-2025 |
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| Version number | 10 |
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