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Cellosaurus UKE-1 (CVCL_0104)

[Text version]
Cell line name UKE-1
Synonyms UKE1; GM23245
Accession CVCL_0104
Resource Identification Initiative To cite this cell line use: UKE-1 (RRID:CVCL_0104)
Comments Omics: Genomics; Whole exome sequencing.
Omics: Transcriptomics; Microarray.
Omics: Transcriptomics; RNAseq.
Omics: Variations; SNP array analysis.
Donor information: Patient had a essential thrombocythemia transformed into acute leukemia.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Sequence variations
HLA typing Source: PubMed=26589293
Class I
HLA-AA*02:01,03:01
HLA-BB*07:02,35:03
HLA-CC*04:01,07:02
Class II
HLA-DQDQA1*01:02,04:01
DQB1*04:01,06:02
HLA-DRDRB1*08:01,15:01
Disease Essential thrombocythemia (NCIt: C3407)
Essential thrombocythemia (ORDO: Orphanet_3318)
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Hierarchy Children:
CVCL_4Z62 (UKE-1/TGR)
Sex of cell Female
Age at sampling 59Y
Category Cancer cell line
Publications

PubMed=10640966; DOI=10.1002/(SICI)1097-0142(20000115)88:2<344::AID-CNCR14>3.0.CO;2-6
Walter Fiedler, R. Peter Henke, Suleyman Ergun, Udo Schumacher, Ursula M. Gehling, Gabi Vohwinkel, Nerbil Kilic, Dieter K. Hossfeld;
Derivation of a new hematopoietic cell line with endothelial features from a patient with transformed myeloproliferative syndrome: a case report.
Cancer 88:344-351(2000)

PubMed=16408098; DOI=10.1038/sj.leu.2404081
Hilmar Quentmeier, Roderick A.F. MacLeod, Margarete Zaborski, Hans Gunther Drexler;
JAK2 V617F tyrosine kinase mutation in cell lines derived from myeloproliferative disorders.
Leukemia 20:471-476(2006)

PubMed=22829968; DOI=10.1038/bcj.2012.11; PMCID=PMC3346679
Caroline Buors, Nathalie Douet-Guilbert, Frederic Morel, Lydie Lecucq, Bruno Cassinat, Valerie Ugo;
Clonal evolution in UKE-1 cell line leading to an increase in JAK2 copy number.
Blood Cancer J. 2:e66.1-e66.3(2012)

PubMed=25485619; DOI=10.1038/nbt.3080
Christiaan Klijn, Steffen Durinck, Eric W. Stawiski, Peter M. Haverty, Zhao-Shi Jiang, Han-Bin Liu, Jeremiah Degenhardt, Oleg Mayba, Florian Gnad, Jin-Feng Liu, Gregoire Pau ...Show all 30 authors... , Jens Reeder, Yi Cao, Kiran Mukhyala, Suresh K. Selvaraj, Ma-Mie Yu, Gregory J. Zynda, Matthew J. Brauer, Thomas D. Wu, Robert Clifford Gentleman, Gerard Manning, Robert L. Yauch, Richard Bourgon, David Stokoe, Zora Modrusan, Richard M. Neve, Frederic J. de Sauvage, Jeffrey Settleman, Somasekar Seshagiri, Ze-Min Zhang; Show fewer authors
A comprehensive transcriptional portrait of human cancer cell lines.
Nat. Biotechnol. 33:306-312(2015)

PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878
Jelle Scholtalbers, Sebastian Boegel, Thomas Bukur, Marius Byl, Sebastian Goerges, Patrick Sorn, Martin Loewer, Ugur Sahin, John C. Castle;
TCLP: an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression.
Genome Med. 7:118.1-118.7(2015)

Cross-references
Cell line collections (Providers) Coriell; GM23245
Cell line databases/resources cancercelllines; CVCL_0104
Anatomy/cell type resources BTO; BTO_0004765
Chemistry resources PharmacoDB; UKE1_1641_2019
Encyclopedic resources Wikidata; Q54990275
Experimental variables resources EFO; EFO_0006307
Gene expression databases ArrayExpress; E-MTAB-2706
GEO; GSM1374976
Polymorphism and mutation databases Cosmic; 1012055
Cosmic; 1281361
Cosmic; 1519161
Cosmic; 1633514
Cosmic; 2306996
Sequence databases EGA; EGAS00001000610
EGA; EGAS00001002554
Entry history
Entry creation04-Apr-2012
Last entry update10-Apr-2025
Version number27