ID   TTC-1240 BAF47
AC   CVCL_QW57
SY   TTC1240 BAF47; TTC1240_BAF47
DR   GEO; GSM2409676
DR   GEO; GSM2409677
DR   GEO; GSM2409678
DR   GEO; GSM2409679
DR   GEO; GSM2409680
DR   GEO; GSM2409681
DR   GEO; GSM2409708
DR   GEO; GSM2495987
DR   GEO; GSM2495989
DR   GEO; GSM2787355
DR   Wikidata; Q54973231
RX   PubMed=28945250;
CC   Characteristics: Transfection of SMARCB1 rescues the phenotype of the parent cell line which has a deleterious mutation in that gene.
CC   Transfected with: HGNC; 11103; SMARCB1.
CC   Omics: H3K27ac ChIP-seq epigenome analysis.
CC   Omics: H3K27me3 ChIP-seq epigenome analysis.
CC   Omics: H3K4me1 ChIP-seq epigenome analysis.
CC   Omics: H3K4me3 ChIP-seq epigenome analysis.
CC   Omics: Transcriptome analysis by RNAseq.
CC   Derived from site: Metastatic; Brain; UBERON=UBERON_0000955.
DI   NCIt; C8715; Rhabdoid tumor of the kidney
DI   ORDO; Orphanet_69077; Rhabdoid tumor
OX   NCBI_TaxID=9606; ! Homo sapiens (Human)
HI   CVCL_8002 ! TTC-1240
SX   Female
AG   9M
CA   Cancer cell line
DT   Created: 15-11-17; Last updated: 29-06-23; Version: 6
//
RX   PubMed=28945250; DOI=10.1038/ng.3958;
RA   Nakayama R.T., Pulice J.L., Valencia A.M., McBride M.J.,
RA   McKenzie Z.M., Gillespie M.A., Ku W.L., Teng M.-X., Cui K.-R.,
RA   Williams R.T., Cassel S.H., Qing H., Widmer C.J., Demetri G.D.,
RA   Irizarry R.A., Zhao K.-J., Ranish J.A., Kadoch C.;
RT   "SMARCB1 is required for widespread BAF complex-mediated activation of
RT   enhancers and bivalent promoters.";
RL   Nat. Genet. 49:1613-1623(2017).
//