ID   GM12892
AC   CVCL_9631
DR   CLO; CLO_0022856
DR   EFO; EFO_0002786
DR   BioSample; SAMN00801914
DR   Coriell; GM12892
DR   ENCODE; ENCBS055ENC
DR   ENCODE; ENCBS255UYZ
DR   ENCODE; ENCBS287ATY
DR   ENCODE; ENCBS564VMX
DR   ENCODE; ENCBS633AAA
DR   ENCODE; ENCBS698HPL
DR   ENCODE; ENCBS726USL
DR   ENCODE; ENCBS781AAA
DR   ENCODE; ENCBS813EMP
DR   ENCODE; ENCBS850AAA
DR   GEO; GSM112570
DR   GEO; GSM112873
DR   GEO; GSM188849
DR   GEO; GSM291700
DR   GEO; GSM315039
DR   GEO; GSM421105
DR   GEO; GSM486857
DR   GEO; GSM486858
DR   GEO; GSM489282
DR   GEO; GSM489283
DR   GEO; GSM489295
DR   GEO; GSM489296
DR   GEO; GSM649301
DR   GEO; GSM649856
DR   GEO; GSM651140
DR   GEO; GSM651141
DR   GEO; GSM651142
DR   GEO; GSM651143
DR   GEO; GSM651144
DR   GEO; GSM651145
DR   GEO; GSM651146
DR   GEO; GSM651147
DR   GEO; GSM651156
DR   GEO; GSM651157
DR   GEO; GSM651158
DR   GEO; GSM651159
DR   GEO; GSM659990
DR   GEO; GSM660186
DR   GEO; GSM660401
DR   GEO; GSM816657
DR   GEO; GSM905906
DR   GEO; GSM906001
DR   GEO; GSM906096
DR   IGSR; NA12892
DR   Wikidata; Q54846193
RX   PubMed=17122850;
RX   PubMed=19043577;
RX   PubMed=19797678;
RX   PubMed=20398888;
RX   PubMed=20856902;
RX   PubMed=21418647;
RX   PubMed=23325432;
RX   PubMed=23676674;
RX   PubMed=26621101;
RX   PubMed=27792722;
WW   http://genome.ucsc.edu/ENCODE/protocols/cell/human/GM12892_Crawford_protocol.pdf
WW   http://www.completegenomics.com/documents/PublicGenomes.pdf
WW   https://www.cephb.fr/en/familles_CEPH.php
CC   Part of: CEPH/Utah pedigree cell line collection.
CC   Part of: ENCODE project common cell types; tier 3.
CC   Part of: International Genome Sample Resource (1000 genomes project) cell lines.
CC   Registration: CEPH Families Reference Panel; 146316.
CC   Population: Caucasian; Utah residents with ancestry from Northern and Western Europe.
CC   HLA typing: A*02:01,11; B*15:01,56; C*01,04:01; DPA1*01:03,02:01:01; DPB1*06:01,14:01; DQA1*01,01; DQB1*05,05; DRB1*01,01 (PubMed=27792722).
CC   Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
CC   Omics: CNV analysis.
CC   Omics: Deep proteome analysis.
CC   Omics: DNA methylation analysis.
CC   Omics: Genome sequenced.
CC   Omics: SNP array analysis.
CC   Omics: Transcriptome analysis by microarray.
CC   Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
OX   NCBI_TaxID=9606; ! Homo sapiens (Human)
SX   Female
AG   Age unspecified
CA   Transformed cell line
DT   Created: 06-06-12; Last updated: 29-06-23; Version: 25
//
RX   PubMed=17122850; DOI=10.1038/nature05329;
RA   Redon R., Ishikawa S., Fitch K.R., Feuk L., Perry G.H., Andrews T.D.,
RA   Fiegler H., Shapero M.H., Carson A.R., Chen W.-W., Cho E.K., Dallaire S.,
RA   Freeman J.L., Gonzalez J.R., Gratacos M., Huang J., Kalaitzopoulos D.,
RA   Komura D., MacDonald J.R., Marshall C.R., Mei R., Montgomery L.,
RA   Nishimura K., Okamura K., Shen F., Somerville M.J., Tchinda J.,
RA   Valsesia A., Woodwark C., Yang F.-T., Zhang J.-J., Zerjal T., Zhang J.,
RA   Armengol L., Conrad D.F., Estivill X., Tyler-Smith C., Carter N.P.,
RA   Aburatani H., Lee C., Jones K.W., Scherer S.W., Hurles M.E.;
RT   "Global variation in copy number in the human genome.";
RL   Nature 444:444-454(2006).
//
RX   PubMed=19043577; DOI=10.1371/journal.pgen.1000287;
RA   Choy E., Yelensky R., Bonakdar S., Plenge R.M., Saxena R.,
RA   De Jager P.L., Shaw S.Y., Wolfish C.S., Slavik J.M., Cotsapas C.,
RA   Rivas M.A., Dermitzakis E.T., Cahir-McFarland E., Kieff E.D.,
RA   Hafler D.A., Daly M.J., Altshuler D.M.;
RT   "Genetic analysis of human traits in vitro: drug response and gene
RT   expression in lymphoblastoid cell lines.";
RL   PLoS Genet. 4:E1000287-E1000287(2008).
//
RX   PubMed=19797678; DOI=10.1101/gr.097600.109;
RA   Nayak R.R., Kearns M., Spielman R.S., Cheung V.G.;
RT   "Coexpression network based on natural variation in human gene
RT   expression reveals gene interactions and functions.";
RL   Genome Res. 19:1953-1962(2009).
//
RX   PubMed=20398888; DOI=10.1016/j.ajhg.2010.03.017;
RA   Dombroski B.A., Nayak R.R., Ewens K.G., Ankener W., Cheung V.G.,
RA   Spielman R.S.;
RT   "Gene expression and genetic variation in response to endoplasmic
RT   reticulum stress in human cells.";
RL   Am. J. Hum. Genet. 86:719-729(2010).
//
RX   PubMed=20856902; DOI=10.1371/journal.pbio.1000480;
RA   Cheung V.G., Nayak R.R., Wang I.X.-R., Elwyn S., Cousins S.M., Morley M.,
RA   Spielman R.S.;
RT   "Polymorphic cis- and trans-regulation of human gene expression.";
RL   PLoS Biol. 8:e1000480.1-e1000480.14(2010).
//
RX   PubMed=21418647; DOI=10.1186/gb-2011-12-3-r25;
RA   Morcos L., Ge B., Koka V., Lam K.C.L., Pokholok D.K., Gunderson K.L.,
RA   Montpetit A., Verlaan D.J., Pastinen T.;
RT   "Genome-wide assessment of imprinted expression in human cells.";
RL   Genome Biol. 12:R25.1-R25.14(2011).
//
RX   PubMed=23325432; DOI=10.1101/gr.147942.112;
RA   Varley K.E., Gertz J., Bowling K.M., Parker S.L., Reddy T.E.,
RA   Pauli-Behn F., Cross M.K., Williams B.A., Stamatoyannopoulos J.A.,
RA   Crawford G.E., Absher D.M., Wold B.J., Myers R.M.;
RT   "Dynamic DNA methylation across diverse human cell lines and
RT   tissues.";
RL   Genome Res. 23:555-567(2013).
//
RX   PubMed=23676674; DOI=10.1038/nature12223;
RA   Wu L.-F., Candille S.I., Choi Y., Xie D., Jiang L.-H., Li-Pook-Than J.,
RA   Tang H., Snyder M.P.;
RT   "Variation and genetic control of protein abundance in humans.";
RL   Nature 499:79-82(2013).
//
RX   PubMed=26621101; DOI=10.1016/j.jmoldx.2015.08.005;
RA   Pratt V.M., Everts R.E., Aggarwal P., Beyer B.N., Broeckel U.,
RA   Epstein-Baak R., Hujsak P., Kornreich R., Liao J., Lorier R.,
RA   Scott S.A., Smith C.-Y.H., Toji L.H., Turner A., Kalman L.V.;
RT   "Characterization of 137 genomic DNA reference materials for 28
RT   pharmacogenetic genes: a GeT-RM collaborative project.";
RL   J. Mol. Diagn. 18:109-123(2016).
//
RX   PubMed=27792722; DOI=10.1371/journal.pcbi.1005151;
RA   Dilthey A.T., Gourraud P.-A., Mentzer A.J., Cereb N., Iqbal Z.,
RA   McVean G.A.T.;
RT   "High-accuracy HLA type inference from whole-genome sequencing data
RT   using population reference graphs.";
RL   PLoS Comput. Biol. 12:e1005151.1-e1005151.16(2016).
//