ID KP-N-RT-BM-1 AC CVCL_1339 SY KPNRTBM1; KP-N-RT(BM1); RT-BM-1; RT-BM 1; RTBM1; KP-N-RT-BM; KP-N-RTBM; RT-BM; BM1; KP-N-RT; Kyoto Pediatrics-Neuroblastoma-RT-Bone Marrow DR ArrayExpress; E-MTAB-783 DR ArrayExpress; E-MTAB-2770 DR BioSample; SAMN03470963 DR BioSample; SAMN10987720 DR cancercelllines; CVCL_1339 DR Cell_Model_Passport; SIDM00557 DR CGH-DB; 69-1 DR CGH-DB; 9079-4 DR ChEMBL-Cells; CHEMBL3308339 DR ChEMBL-Targets; CHEMBL2366107 DR Cosmic; 848926 DR Cosmic; 924189 DR Cosmic-CLP; 924189 DR DepMap; ACH-000345 DR GDSC; 924189 DR GEO; GSM887239 DR GEO; GSM888313 DR GEO; GSM1670005 DR IARC_TP53; 27697 DR JCRB; IFO50432 DR LiGeA; CCLE_682 DR PharmacoDB; KPNRTBM1_786_2019 DR PRIDE; PXD030304 DR Progenetix; CVCL_1339 DR PubChem_Cell_line; CVCL_1339 DR Wikidata; Q54900391 RX CelloPub=CLPUB00582; RX DOI=10.1007/0-306-46872-7_2; RX PubMed=3731124; RX PubMed=10628353; RX PubMed=11129446; RX PubMed=11501497; RX PubMed=12702577; RX PubMed=15892104; RX PubMed=20164919; RX PubMed=22460905; RX PubMed=23268333; RX PubMed=25877200; RX PubMed=26589293; RX PubMed=27397505; RX PubMed=30894373; RX PubMed=31068700; RX PubMed=35839778; CC Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). CC Part of: COSMIC cell lines project. CC Population: Japanese. CC Doubling time: 42 hours (PubMed=10628353). CC HLA typing: A*24:02,31:01; B*35:03,56:01; C*01:02,03:03 (PubMed=26589293). CC Microsatellite instability: Stable (MSS) (Sanger). CC Omics: Genomics; DNA methylation analysis. CC Omics: Genomics; Whole exome sequencing. CC Omics: Phenotyping; Drug screening. CC Omics: Proteomics; Quantitative. CC Omics: Transcriptomics; Microarray. CC Omics: Transcriptomics; RNAseq. CC Omics: Variations; Array-based CGH. CC Omics: Variations; SNP array analysis. CC Genome ancestry: African=0.43%; Native American=0.27%; East Asian, North=72.99%; East Asian, South=24.04%; South Asian=0%; European, North=0%; European, South=2.27% (PubMed=30894373). CC Derived from site: Metastatic; Bone marrow; UBERON=UBERON_0002371. ST Source(s): Cosmic-CLP=924189; JCRB=IFO50432; PubMed=25877200 ST Amelogenin: X ST CSF1PO: 11,12 ST D13S317: 9,12 ST D16S539: 10,12 ST D18S51: 15,17 ST D19S433: 13 ST D21S11: 30,31.2 ST D2S1338: 20 ST D3S1358: 15,17 ST D5S818: 10,13 ST D7S820: 10,11 ST D8S1179: 12,13 ST FGA: 20,21 ST Penta D: 9,12 ST Penta E: 12,16 ST TH01: 6,7 ST TPOX: 8 ST vWA: 17,20 DI NCIt; C4827; Adrenal gland neuroblastoma DI ORDO; Orphanet_635; Neuroblastoma OX NCBI_TaxID=9606; ! Homo sapiens (Human) OI CVCL_9511 ! KP-N-RT-LN SX Female AG 1Y2M CA Cancer cell line DT Created: 04-04-12; Last updated: 14-08-25; Version: 37 CH CVCL_E9WB ! BM1R2 CH CVCL_9512 ! KP-N-RT-RT-BMV-C6 // RX PubMed=11501497; DOI=10.2739/kurumemedj.48.159; RA Ueda, Koichiro RT "Detection of the retinoic acid-regulated genes in a RTBM1 RT neuroblastoma cell line using cDNA microarray."; RL Kurume Med. J. 48:159-164(2001). // RX PubMed=25877200; DOI=10.1038/nature14397; RA Yu, Ma-Mie RA Selvaraj, Suresh K. RA Liang-Chu, May M.Y. RA Aghajani, Sahar RA Busse, Matthew RA Yuan, Jean RA Lee, Genee RA Peale, Franklin V. RA Klijn, Christiaan RA Bourgon, Richard RA Kaminker, Joshua S. RA Neve, Richard M. RT "A resource for cell line authentication, annotation and quality RT control."; RL Nature 520:307-311(2015). // RX PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103; RA Ghandi, Mahmoud RA Huang, Franklin W. RA Jane-Valbuena, Judit RA Kryukov, Gregory V. RA Lo, Christopher C. RA McDonald, E. Robert 3rd RA Barretina, Jordi Ginesta RA Gelfand, Ellen T. RA Bielski, Craig M. RA Li, Hao-Xin RA Hu, Kevin RA Andreev-Drakhlin, Alexander Y. RA Kim, Jaegil RA Hess, Julian M. RA Haas, Brian J. RA Aguet, Francois RA Weir, Barbara A. RA Rothberg, Michael V. RA Paolella, Brenton R. RA Lawrence, Michael Scott RA Akbani, Rehan RA Lu, Yi-Ling RA Tiv, Hong L. RA Gokhale, Prafulla C. RA de Weck, Antoine RA Mansour, Ali Amin RA Oh, Coyin RA Shih, Juliann RA Hadi, Kevin RA Rosen, Yanay RA Bistline, Jonathan RA Venkatesan, Kavitha RA Reddy, Anupama RA Sonkin, Dmitriy RA Liu, Manway RA Lehar, Joseph RA Korn, Joshua M. RA Porter, Dale A. RA Jones, Michael D. RA Golji, Javad RA Caponigro, Giordano RA Taylor, Jordan E. RA Dunning, Caitlin M. RA Creech, Amanda L. RA Warren, Allison C. RA McFarland, James M. RA Zamanighomi, Mahdi RA Kauffmann, Audrey RA Stransky, Nicolas RA Imielinski, Marcin RA Maruvka, Yosef E. RA Cherniack, Andrew D. RA Tsherniak, Aviad RA Vazquez, Francisca RA Jaffe, Jacob D. RA Lane, Andrew Alan RA Weinstock, David M. RA Johannessen, Cory M. RA Morrissey, Michael P. RA Stegmeier, Frank RA Schlegel, Robert RA Hahn, William Chun RA Getz, Gad RA Mills, Gordon B. RA Boehm, Jesse S. RA Golub, Todd Robert RA Garraway, Levi Alexander RA Sellers, William Raj RT "Next-generation characterization of the Cancer Cell Line RT Encyclopedia."; RL Nature 569:503-508(2019). // RX PubMed=10628353; RA Yasuno, Tetsuya RA Matsumura, Takafumi RA Shikata, Takuma RA Inazawa, Johji RA Sakabe, Tomoya RA Tsuchida, Shigeki RA Takahata, Takenori RA Miyairi, Shinichi RA Naganuma, Akira RA Sawada, Tadashi RT "Establishment and characterization of a cisplatin-resistant human RT neuroblastoma cell line."; RL Anticancer Res. 19:4049-4057(1999). // RX PubMed=3731124; RA Sugimoto, Tohru RA Sawada, Tadashi RA Matsumura, Takafumi RA Kemshead, John T. RA Ishii, Takashi RA Horii, Yoshihiro RA Morioka, Hiroyuki RA Morita, Masuji RA Reynolds, Charles Patrick RT "Identical expression of cell surface membrane antigens on two parent RT and eighteen cloned cell lines derived from two different RT neuroblastoma metastases of the same patient."; RL Cancer Res. 46:4765-4769(1986). // RX DOI=10.1007/0-306-46872-7_2; RA Thiele, Carol Jeanne RT "Neuroblastoma."; RL (In book chapter) Human cell culture. Vol. 1. Cancer cell lines part 1; Masters, John R.W. & Palsson, Bernhard Orn (eds.); pp.21-53; Kluwer Academic Publishers; New York; USA (1999). // RX PubMed=22460905; DOI=10.1038/nature11003; PMCID=PMC3320027; RA Barretina, Jordi Ginesta RA Caponigro, Giordano RA Stransky, Nicolas RA Venkatesan, Kavitha RA Margolin, Adam A. RA Kim, Sungjoon RA Wilson, Christopher J. RA Lehar, Joseph RA Kryukov, Gregory V. RA Sonkin, Dmitriy RA Reddy, Anupama RA Liu, Manway RA Murray, Lauren RA Berger, Michael F. RA Monahan, John E. RA Morais, Paula RA Meltzer, Jodi RA Korejwa, Adam RA Jane-Valbuena, Judit RA Mapa, Felipa A. RA Thibault, Joseph RA Bric-Furlong, Eva RA Raman, Pichai RA Shipway, Aaron RA Engels, Ingo H. RA Cheng, Jill RA Yu, Guo-Ying K. RA Yu, Jian-Jun RA Aspesi, Peter Jr. RA de Silva, Melanie RA Jagtap, Kalpana RA Jones, Michael D. RA Wang, Li RA Hatton, Charles RA Palescandolo, Emanuele RA Gupta, Supriya RA Mahan, Scott RA Sougnez, Carrie RA Onofrio, Robert C. RA Liefeld, Ted RA MacConaill, Laura Eleanor RA Winckler, Wendy RA Reich, Michael RA Li, Nan-Xin RA Mesirov, Jill P. RA Gabriel, Stacey B. RA Getz, Gad RA Ardlie, Kristin RA Chan, Vivien RA Myer, Vic E. RA Weber, Barbara L. RA Porter, Jeff RA Warmuth, Markus RA Finan, Peter RA Harris, Jennifer L. RA Meyerson, Matthew Langer RA Golub, Todd Robert RA Morrissey, Michael P. RA Sellers, William Raj RA Schlegel, Robert RA Garraway, Levi Alexander RT "The Cancer Cell Line Encyclopedia enables predictive modelling of RT anticancer drug sensitivity."; RL Nature 483:603-607(2012). // RX PubMed=23268333; DOI=10.1016/j.canlet.2012.12.011; RA Sugimoto, Tohru RA Gotoh, Takahiro RA Yagyu, Shigeki RA Kuroda, Hiroshi RA Iehara, Tomoko RA Hosoi, Hajime RA Ohta, Sigeru RA Ohira, Miki RA Nakagawara, Akira RT "A MYCN-amplified cell line derived from a long-term event-free RT survivor among our sixteen established neuroblastoma cell lines."; RL Cancer Lett. 331:115-121(2013). // RX PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878; RA Scholtalbers, Jelle RA Boegel, Sebastian RA Bukur, Thomas RA Byl, Marius RA Goerges, Sebastian RA Sorn, Patrick RA Loewer, Martin RA Sahin, Ugur RA Castle, John C. RT "TCLP: an online cancer cell line catalogue integrating HLA type, RT predicted neo-epitopes, virus and gene expression."; RL Genome Med. 7:118.1-118.7(2015). // RX PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469; RA Iorio, Francesco RA Knijnenburg, Theo A. RA Vis, Daniel J. RA Bignell, Graham Robert RA Menden, Michael Patrick RA Schubert, Michael RA Aben, Nanne RA Goncalves, Emanuel RA Barthorpe, Syd RA Lightfoot, Howard RA Cokelaer, Thomas RA Greninger, Patricia RA van Dyk, Ewald RA Chang, Han RA de Silva, Heshani RA Heyn, Holger RA Deng, Xian-Ming RA Egan, Regina K. RA Liu, Qing-Song RA Mironenko, Tatiana RA Mitropoulos, Xeni RA Richardson, Laura RA Wang, Jin-Hua RA Zhang, Ting-Hu RA Moran, Sebastian RA Sayols, Sergi RA Soleimani, Maryam RA Tamborero, David RA Lopez-Bigas, Nuria RA Ross-Macdonald, Petra RA Esteller, Manel RA Gray, Nathanael S. RA Haber, Daniel Arie RA Stratton, Michael Rudolf RA Benes, Cyril Henri RA Wessels, Lodewyk F.A. RA Saez-Rodriguez, Julio RA McDermott, Ultan RA Garnett, Mathew J. RT "A landscape of pharmacogenomic interactions in cancer."; RL Cell 166:740-754(2016). // RX PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775; RA Goncalves, Emanuel RA Poulos, Rebecca C. RA Cai, Zhao-Xiang RA Barthorpe, Syd RA Manda, Srikanth S. RA Lucas, Natasha RA Beck, Alexandra RA Bucio-Noble, Daniel RA Dausmann, Michael RA Hall, Caitlin RA Hecker, Michael RA Koh, Jennifer RA Lightfoot, Howard RA Mahboob, Sadia RA Mali, Iman RA Morris, James RA Richardson, Laura RA Seneviratne, Akila J. RA Shepherd, Rebecca RA Sykes, Erin RA Thomas, Frances RA Valentini, Sara RA Williams, Steven G. RA Wu, Yang-Xiu RA Xavier, Dylan RA MacKenzie, Karen L. RA Hains, Peter G. RA Tully, Brett RA Robinson, Phillip James RA Zhong, Qing RA Garnett, Mathew J. RA Reddel, Roger Robert RT "Pan-cancer proteomic map of 949 human cell lines."; RL Cancer Cell 40:835-849.e8(2022). // RX PubMed=11129446; DOI=10.1097/00019606-200012000-00007; RA Sugimoto, Tohru RA Mine, Hiroshi RA Horii, Yoshihiro RA Takahashi, Katsuhito RA Nagai, Ryozo RA Morishita, Ryuichi RA Komada, Mihiro RA Asada, Yujiro RA Sawada, Tadashi RT "Neuroblastoma cell lines showing smooth muscle cell phenotypes."; RL Diagn. Mol. Pathol. 9:221-228(2000). // RX PubMed=15892104; DOI=10.1002/gcc.20198; RA Mosse, Yael P. RA Greshock, Joel RA Margolin, Adam A. RA Naylor, Tara RA Cole, Kristina A. RA Khazi, Deepa RA Hii, George RA Winter, Cynthia RA Shahzad, Syed RA Asziz, Muhammad Usman RA Biegel, Jaclyn A. RA Weber, Barbara L. RA Maris, John Matthew RT "High-resolution detection and mapping of genomic DNA alterations in RT neuroblastoma."; RL Genes Chromosomes Cancer 43:390-403(2005). // RX PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113; RA Bignell, Graham Robert RA Greenman, Christopher D. RA Davies, Helen R. RA Butler, Adam P. RA Edkins, Sarah RA Andrews, Jenny M. RA Buck, Gemma RA Chen, Lina RA Beare, David RA Latimer, Calli RA Widaa, Sara RA Hinton, Jonathan RA Fahey, Ciara RA Fu, Bei-Yuan RA Swamy, Sajani RA Dalgliesh, Gillian L. RA Teh, Bin Tean RA Deloukas, Panos RA Yang, Feng-Tang RA Campbell, Peter J. RA Futreal, P. Andrew RA Stratton, Michael Rudolf RT "Signatures of mutation and selection in the cancer genome."; RL Nature 463:893-898(2010). // RX PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675; RA Dutil, Julie RA Chen, Zhi-Hua RA Monteiro, Alvaro N.A. RA Teer, Jamie K. RA Eschrich, Steven A. RT "An interactive resource to probe genetic diversity and estimated RT ancestry in cancer cell lines."; RL Cancer Res. 79:1263-1273(2019). // RX PubMed=12702577; RA Saito-Ohara, Fumiko RA Imoto, Issei RA Inoue, Jun RA Hosoi, Hajime RA Nakagawara, Akira RA Sugimoto, Tohru RA Inazawa, Johji RT "PPM1D is a potential target for 17q gain in neuroblastoma."; RL Cancer Res. 63:1876-1883(2003). // RX CelloPub=CLPUB00582; RA Sugimoto, Tohru RA Kuroda, Hiroshi RA Yagyu, Shigeki RA Gotoh, Takahiro RA Osone, Shinya RA Tamura, Shinichi RA Iehara, Tomoko RA Hosoi, Hajime RT "Cellular and molecular characteristics of established neuroblastoma RT cell lines."; RL J. Cancer Res. Therap. Oncol. 7:201.1-201.15(2019). //