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Cellosaurus S003610 (CVCL_V987)

[Text version]
Cell line name S003610
Accession CVCL_V987
Resource Identification Initiative To cite this cell line use: S003610 (RRID:CVCL_V987)
Comments Group: Non-human primate cell line.
Part of: Yerkes National Primate Research Center cell line collection.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: H3K27ac ChIP-seq epigenome analysis.
Omics: H3K27me3 ChIP-seq epigenome analysis.
Omics: H3K4me1 ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: Transcriptome analysis by microarray.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Pan troglodytes (Chimpanzee) (NCBI Taxonomy: 9598)
Originate from same individual CVCL_V833 ! S003611
Sex of cell Male
Age at sampling 6Y
Category Transformed cell line
Publications

PubMed=19043577; DOI=10.1371/journal.pgen.1000287; PMCID=PMC2583954
Choy E., Yelensky R., Bonakdar S., Plenge R.M., Saxena R., De Jager P.L., Shaw S.Y., Wolfish C.S., Slavik J.M., Cotsapas C., Rivas M.A., Dermitzakis E.T., Cahir-McFarland E., Kieff E.D., Hafler D.A., Daly M.J., Altshuler D.M.
Genetic analysis of human traits in vitro: drug response and gene expression in lymphoblastoid cell lines.
PLoS Genet. 4:E1000287-E1000287(2008)

PubMed=22797897; DOI=10.1073/pnas.1205199109; PMCID=PMC3411951
Iskow R.C., Gokcumen O., Abyzov A., Malukiewicz J., Zhu Q.-H., Sukumar A.T., Pai A.A., Mills R.E., Habegger L., Cusanovich D.A., Rubel M.A., Perry G.H., Gerstein M.B., Stone A.C., Gilad Y., Lee C.
Regulatory element copy number differences shape primate expression profiles.
Proc. Natl. Acad. Sci. U.S.A. 109:12656-12661(2012)

PubMed=23697280
Robledo R., Lorenz J., Beck J.C., Else J., Bender P.
Genetic analysis of putative familial relationships in a captive chimpanzee (Pan troglodytes) population.
Coll. Antropol. 37:245-250(2013)

PubMed=25468404; DOI=10.1186/s13059-014-0547-3; PMCID=PMC4290387
Zhou X., Cain C.E., Myrthil M., Lewellen N., Michelini K., Davenport E.R., Stephens M., Pritchard J.K., Gilad Y.
Epigenetic modifications are associated with inter-species gene expression variation in primates.
Genome Biol. 15:547.1-547.19(2014)

Cross-references
Cell line collections (Providers) Coriell; S003610 - Discontinued
Encyclopedic resources Wikidata; Q54951562
Gene expression databases GEO; GSM291941
GEO; GSM291942
GEO; GSM291943
GEO; GSM291944
GEO; GSM945675
GEO; GSM1468860
GEO; GSM1468868
GEO; GSM1468876
GEO; GSM1468884
GEO; GSM1468892
GEO; GSM1468900
Entry history
Entry creation16-Apr-2014
Last entry update30-Jan-2024
Version number14