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Cellosaurus AG18359 (CVCL_V986)

[Text version]
Cell line name AG18359
Synonyms Min18359; Min 18359
Accession CVCL_V986
Resource Identification Initiative To cite this cell line use: AG18359 (RRID:CVCL_V986)
Comments Group: Non-human primate cell line.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: Deep proteome analysis.
Omics: CTCF ChIP-seq epigenome analysis.
Omics: H3K27ac ChIP-seq epigenome analysis.
Omics: H3K27me3 ChIP-seq epigenome analysis.
Omics: H3K4me1 ChIP-seq epigenome analysis.
Omics: H3K4me3 ChIP-seq epigenome analysis.
Omics: YY1 ChIP-seq epigenome analysis.
Omics: Transcriptome analysis by RNAseq.
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
Species of origin Pan troglodytes (Chimpanzee) (NCBI Taxonomy: 9598)
Sex of cell Female
Age at sampling 29Y
Category Transformed cell line
Publications

PubMed=22720000; DOI=10.1371/journal.pone.0038958; PMCID=PMC3375281
Marotta M., Piontkivska H., Tanaka H.
Molecular trajectories leading to the alternative fates of duplicate genes.
PLoS ONE 7:E38958-E38958(2012)

PubMed=22797897; DOI=10.1073/pnas.1205199109; PMCID=PMC3411951
Iskow R.C., Gokcumen O., Abyzov A., Malukiewicz J., Zhu Q.-H., Sukumar A.T., Pai A.A., Mills R.E., Habegger L., Cusanovich D.A., Rubel M.A., Perry G.H., Gerstein M.B., Stone A.C., Gilad Y., Lee C.
Regulatory element copy number differences shape primate expression profiles.
Proc. Natl. Acad. Sci. U.S.A. 109:12656-12661(2012)

PubMed=24136357; DOI=10.1126/science.1242379; PMCID=PMC3994702
Khan Z., Ford M.J., Cusanovich D.A., Mitrano A., Pritchard J.K., Gilad Y.
Primate transcript and protein expression levels evolve under compensatory selection pressures.
Science 342:1100-1104(2013)

PubMed=24380390; DOI=10.1186/gb-2013-14-12-r148; PMCID=PMC4056453
Schwalie P.C., Ward M.C., Cain C.E., Faure A.J., Gilad Y., Odom D.T., Flicek P.
Co-binding by YY1 identifies the transcriptionally active, highly conserved set of CTCF-bound regions in primate genomes.
Genome Biol. 14:R148.1-R148.15(2013)

PubMed=25468404; DOI=10.1186/s13059-014-0547-3; PMCID=PMC4290387
Zhou X., Cain C.E., Myrthil M., Lewellen N., Michelini K., Davenport E.R., Stephens M., Pritchard J.K., Gilad Y.
Epigenetic modifications are associated with inter-species gene expression variation in primates.
Genome Biol. 15:547.1-547.19(2014)

Cross-references
Cell line collections (Providers) Coriell; AG18359 - Discontinued
Encyclopedic resources Wikidata; Q54746775
Gene expression databases ArrayExpress; E-MTAB-1511
GEO; GSM945678
GEO; GSM1204869
GEO; GSM1468859
GEO; GSM1468867
GEO; GSM1468875
GEO; GSM1468883
GEO; GSM1468891
GEO; GSM1468899
Proteomic databases PRIDE; PXD000419
Entry history
Entry creation16-Apr-2014
Last entry update30-Jan-2024
Version number12