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Cellosaurus GM09916 (CVCL_N125)

[Text version]
Cell line name GM09916
Synonyms GM17290
Accession CVCL_N125
Resource Identification Initiative To cite this cell line use: GM09916 (RRID:CVCL_N125)
Comments Part of: Genetic Testing Reference Material (GeT-RM) samples.
Part of: Human variation panel.
Population: Caucasian.
Transformant: NCBI_TaxID; 10376; Epstein-Barr virus (EBV).
Omics: DNA methylation analysis.
Caution: Indicated as originating from a female child in Coriell, but seems to be from a male (PubMed=2916654).
Derived from site: In situ; Peripheral blood; UBERON=UBERON_0000178.
HLA typing Source: Coriell=GM17290
Class I
HLA-BB*57:01

Source: PubMed=2916654
Class I
HLA-AA*01,02
HLA-BB*51,w57

Source: PubMed=29959025
Class I
HLA-AA*11:01:01,26:01:01
HLA-BB*07:02:01,57:01:01
HLA-CC*06:02:01,12:03:01
Class II
HLA-DPDPA1*01:03:01,01:03:01
DPB1*04:01:01,04:01:01
HLA-DQDQA1*01:02:02,01:04:01
DQB1*05:02:01,05:03:01
HLA-DRDRB1*14:54:01,15:01:01
DRB3*02:02:01
DRB5*01:01:01
Species of origin Homo sapiens (Human) (NCBI Taxonomy: 9606)
Sex of cell Male
Age at sampling 5Y
Category Transformed cell line
Publications

PubMed=2916654; PMCID=PMC1879596
Knisely A.S., Harford J.B., Klausner R.D., Taylor S.R.
Neonatal hemochromatosis. The regulation of transferrin-receptor and ferritin synthesis by iron in cultured fibroblastic-line cells.
Am. J. Pathol. 134:439-445(1989)

PubMed=20889555; DOI=10.2353/jmoldx.2010.100090; PMCID=PMC2962854
Pratt V.M., Zehnbauer B.A., Wilson J.A., Epstein-Baak R., Babic N., Bettinotti M.P., Buller-Burckle A.M., Butz K.G., Campbell M., Civalier C., El-Badry A., Farkas D.H., Lyon E., Mandal S., McKinney J., Muralidharan K., Noll L., Sander T., Shabbeer J., Smith C.-Y.H., Telatar M., Toji L.H., Vairavan A., Vance C., Weck K.E., Wu A.H.B., Yeo K.-T.J., Zeller M., Kalman L.V.
Characterization of 107 genomic DNA reference materials for CYP2D6, CYP2C19, CYP2C9, VKORC1, and UGT1A1: a GeT-RM and Association for Molecular Pathology collaborative project.
J. Mol. Diagn. 12:835-846(2010)

PubMed=26621101; DOI=10.1016/j.jmoldx.2015.08.005; PMCID=PMC4695224
Pratt V.M., Everts R.E., Aggarwal P., Beyer B.N., Broeckel U., Epstein-Baak R., Hujsak P., Kornreich R., Liao J., Lorier R., Scott S.A., Smith C.-Y.H., Toji L.H., Turner A., Kalman L.V.
Characterization of 137 genomic DNA reference materials for 28 pharmacogenetic genes: a GeT-RM collaborative project.
J. Mol. Diagn. 18:109-123(2016)

PubMed=29959025; DOI=10.1016/j.jmoldx.2018.05.009; PMCID=PMC6939753
Bettinotti M.P., Ferriola D., Duke J.L., Mosbruger T.L., Tairis N., Jennings L., Kalman L.V., Monos D.S.
Characterization of 108 genomic DNA reference materials for 11 human leukocyte antigen loci: a GeT-RM collaborative project.
J. Mol. Diagn. 20:703-715(2018)

Cross-references
Cell line collections (Providers) Coriell; GM09916 - Discontinued
Coriell; GM17290
Cell line databases/resources CLO; CLO_0013140
Encyclopedic resources Wikidata; Q54844124
Gene expression databases GEO; GSM569741
GEO; GSM596354
GEO; GSM596772
GEO; GSM924892
Entry history
Entry creation05-Nov-2013
Last entry update29-Jun-2023
Version number17