Cellosaurus HSC-39 (CVCL_A385)
Cell line name | HSC-39 | ||||||||||||||||||
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Synonyms | HSC39 | ||||||||||||||||||
Accession | CVCL_A385 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: HSC-39 (RRID:CVCL_A385) | ||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Population: Japanese. Doubling time: 28-30 hours (PubMed=1846312). Microsatellite instability: Stable (MSS) (Sanger). Omics: CRISPR phenotypic screen. Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: Transcriptome analysis by microarray. Derived from site: Metastatic; Ascites; UBERON=UBERON_0007795. | ||||||||||||||||||
Sequence variations |
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Genome ancestry | Source: PubMed=30894373
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Disease | Gastric signet ring cell adenocarcinoma (NCIt: C5250) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Hierarchy | Children:
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Originate from same individual | CVCL_A386 ! HSC-40A | ||||||||||||||||||
Sex of cell | Male | ||||||||||||||||||
Age at sampling | 54Y | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=1322224; JCRB=JCRB1864 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Publications | PubMed=1846312 PubMed=11107048; DOI=10.1046/j.1440-1827.2000.01117.x PubMed=11543663; DOI=10.1006/viro.2001.1071 PubMed=15723654; DOI=10.1111/j.1349-7006.2005.00016.x; PMCID=PMC11160020 PubMed=26934957; DOI=10.1038/srep22371; PMCID=PMC4776110 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=30971826; DOI=10.1038/s41586-019-1103-9 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections (Providers) | JCRB; JCRB1864 | ||||||||||||||||||
Cell line databases/resources | cancercelllines; CVCL_A385
Cell_Model_Passport; SIDM00045 CGH-DB; 106-1 CGH-DB; 9001-4 Cosmic-CLP; 1322224 DepMap; ACH-002141 | ||||||||||||||||||
CRISP screens repositories | BioGRID_ORCS_Cell_line; 891 | ||||||||||||||||||
Chemistry resources | GDSC; 1322224
PharmacoDB; HSC39_621_2019 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54896389 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-3610
GEO; GSM1669905 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 875904
Cosmic; 876557 Cosmic; 877037 Cosmic; 897522 Cosmic; 922691 Cosmic; 926116 Cosmic; 1223584 Cosmic; 1460703 Cosmic; 1518248 Cosmic; 1571763 IARC_TP53; 13724 | ||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 06-Jun-2012 | ||||||||||||||||||
Last entry update | 02-May-2024 | ||||||||||||||||||
Version number | 29 |