Cellosaurus TMK-1 (CVCL_4384)
Cell line name | TMK-1 | ||||||||||||||||||
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Synonyms | TMK1 | ||||||||||||||||||
Accession | CVCL_4384 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: TMK-1 (RRID:CVCL_4384) | ||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Population: Japanese. Doubling time: ~34.9 hours (PubMed=3003017). Microsatellite instability: Stable (MSS) (Sanger). Omics: CRISPR phenotypic screen. Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: Transcriptome analysis by microarray. Derived from site: Metastatic; Lymph node; UBERON=UBERON_0000029. | ||||||||||||||||||
Sequence variations |
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Genome ancestry | Source: PubMed=30894373
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Disease | Gastric adenocarcinoma (NCIt: C4004) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Hierarchy | Parent: CVCL_F953 (SC-6-JCK) | ||||||||||||||||||
Sex of cell | Male | ||||||||||||||||||
Age at sampling | 21Y | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=1299069 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Publications | PubMed=3003017; DOI=10.20772/cancersci1985.76.11_1064 PubMed=1933850 PubMed=1370612; DOI=10.1016/S0006-291X(05)80133-0 DOI=10.1016/B978-0-12-333530-2.50014-9 PubMed=11107048; DOI=10.1046/j.1440-1827.2000.01117.x PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=30971826; DOI=10.1038/s41586-019-1103-9 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line databases/resources | cancercelllines; CVCL_4384
Cell_Model_Passport; SIDM00040 Cosmic-CLP; 1299069 DepMap; ACH-002202 TOKU-E; 4022 | ||||||||||||||||||
Anatomy/cell type resources | BTO; BTO:0003219 | ||||||||||||||||||
CRISP screens repositories | BioGRID_ORCS_Cell_line; 1038 | ||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL4295469
ChEMBL-Targets; CHEMBL4296504 GDSC; 1299069 PharmacoDB; TMK1_1601_2019 PubChem_Cell_line; CVCL_4384 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54972697 | ||||||||||||||||||
Experimental variables resources | EFO; EFO_0002867 | ||||||||||||||||||
Gene expression databases | GEO; GSM552377
GEO; GSM562397 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 887251
Cosmic; 888829 Cosmic; 897537 Cosmic; 922689 Cosmic; 926110 Cosmic; 1093301 Cosmic; 1122341 Cosmic; 1187298 Cosmic; 1223585 Cosmic; 1460701 Cosmic; 1482078 Cosmic; 1518245 Cosmic; 1571762 IARC_TP53; 974 Progenetix; CVCL_4384 | ||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 10-Sep-2024 | ||||||||||||||||||
Version number | 32 |