Cellosaurus NY (CVCL_1613)
Cell line name | NY | ||||||||||||||||||
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Accession | CVCL_1613 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: NY (RRID:CVCL_1613) | ||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Population: Japanese. Doubling time: 21 days (Note=At 18th passage) (PubMed=6596455); ~60 hours (Note=Lot 091198), ~30 hours (Note=Lot 09262016) (JCRB=JCRB0614). Microsatellite instability: Stable (MSS) (Sanger). Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Derived from site: In situ; Bone, right femur; UBERON=UBERON_0000981. | ||||||||||||||||||
HLA typing | Source: PubMed=15289353
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Genome ancestry | Source: PubMed=30894373
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Disease | Osteosarcoma (NCIt: C9145) Osteosarcoma (ORDO: Orphanet_668) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Sex of cell | Male | ||||||||||||||||||
Age at sampling | 15Y | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=910849; JCRB=JCRB0614 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Publications | PubMed=6596455 PubMed=9290701; DOI=10.1002/(SICI)1098-2744(199708)19:4<243::AID-MC5>3.0.CO;2-D PubMed=15289353; DOI=10.1158/0008-5472.CAN-04-0522 PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113 PubMed=20215515; DOI=10.1158/0008-5472.CAN-09-3458; PMCID=PMC2881662 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections (Providers) | JCRB; JCRB0614 | ||||||||||||||||||
Cell line databases/resources | CLO; CLO_0009877
cancercelllines; CVCL_1613 Cell_Model_Passport; SIDM00569 Cosmic-CLP; 910849 DepMap; ACH-002178 LINCS_LDP; LCL-1429 | ||||||||||||||||||
Biological sample resources | BioSample; SAMN03471633 | ||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3308123
ChEMBL-Targets; CHEMBL1075552 GDSC; 910849 PharmacoDB; NY_1175_2019 PubChem_Cell_line; CVCL_1613 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54931209 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-3610 GEO; GSM320822 GEO; GSM827276 GEO; GSM1670289 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 910849
IARC_TP53; 21591 Progenetix; CVCL_1613 | ||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 02-May-2024 | ||||||||||||||||||
Version number | 34 |