Cellosaurus ECC12 (CVCL_1189)
Cell line name | ECC12 | ||||||||||||||||||
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Synonyms | ECC-12; ECC 12 | ||||||||||||||||||
Accession | CVCL_1189 | ||||||||||||||||||
Resource Identification Initiative | To cite this cell line use: ECC12 (RRID:CVCL_1189) | ||||||||||||||||||
Comments | Part of: Cancer Dependency Map project (DepMap) (includes Cancer Cell Line Encyclopedia - CCLE). Part of: COSMIC cell lines project. Population: Japanese. Doubling time: 92 hours (PubMed=8392984). Microsatellite instability: Stable (MSS) (Sanger). Omics: Deep exome analysis. Omics: Deep quantitative proteome analysis. Omics: DNA methylation analysis. Omics: SNP array analysis. Omics: Transcriptome analysis by microarray. Omics: Transcriptome analysis by RNAseq. Derived from site: In situ; Stomach; UBERON=UBERON_0000945. | ||||||||||||||||||
Sequence variations |
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HLA typing | Source: PubMed=26589293
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Genome ancestry | Source: PubMed=30894373
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Disease | Gastric small cell carcinoma (NCIt: C6764) | ||||||||||||||||||
Species of origin | Homo sapiens (Human) (NCBI Taxonomy: 9606) | ||||||||||||||||||
Sex of cell | Male | ||||||||||||||||||
Age at sampling | 63Y | ||||||||||||||||||
Category | Cancer cell line | ||||||||||||||||||
STR profile | Source(s): Cosmic-CLP=906849; RCB=RCB1009 Markers:
Run an STR similarity search on this cell line | ||||||||||||||||||
Publications | PubMed=8392984; DOI=10.1002/ijc.2910540617 PubMed=20164919; DOI=10.1038/nature08768; PMCID=PMC3145113 PubMed=22460905; DOI=10.1038/nature11003; PMCID=PMC3320027 PubMed=26589293; DOI=10.1186/s13073-015-0240-5; PMCID=PMC4653878 PubMed=27397505; DOI=10.1016/j.cell.2016.06.017; PMCID=PMC4967469 PubMed=30894373; DOI=10.1158/0008-5472.CAN-18-2747; PMCID=PMC6445675 PubMed=31068700; DOI=10.1038/s41586-019-1186-3; PMCID=PMC6697103 PubMed=35839778; DOI=10.1016/j.ccell.2022.06.010; PMCID=PMC9387775 | ||||||||||||||||||
Cross-references | |||||||||||||||||||
Cell line collections (Providers) | RCB; RCB1009 | ||||||||||||||||||
Cell line databases/resources | CLO; CLO_0050807
cancercelllines; CVCL_1189 Cell_Model_Passport; SIDM00279 Cosmic-CLP; 906849 DepMap; ACH-000225 LINCS_LDP; LCL-1898 | ||||||||||||||||||
Biological sample resources | BioSample; SAMN03472198
BioSample; SAMN10987760 | ||||||||||||||||||
Chemistry resources | ChEMBL-Cells; CHEMBL3308192
ChEMBL-Targets; CHEMBL2366180 GDSC; 906849 PharmacoDB; ECC12_318_2019 PubChem_Cell_line; CVCL_1189 | ||||||||||||||||||
Encyclopedic resources | Wikidata; Q54831923 | ||||||||||||||||||
Gene expression databases | ArrayExpress; E-MTAB-783
ArrayExpress; E-MTAB-2770 ArrayExpress; E-MTAB-3610 GEO; GSM886995 GEO; GSM888064 GEO; GSM1669751 | ||||||||||||||||||
Polymorphism and mutation databases | Cosmic; 848377
Cosmic; 906849 Cosmic; 1187270 IARC_TP53; 21319 LiGeA; CCLE_821 Progenetix; CVCL_1189 | ||||||||||||||||||
Proteomic databases | PRIDE; PXD030304 | ||||||||||||||||||
Sequence databases | EGA; EGAS00001000978 | ||||||||||||||||||
Entry history | |||||||||||||||||||
Entry creation | 04-Apr-2012 | ||||||||||||||||||
Last entry update | 02-May-2024 | ||||||||||||||||||
Version number | 34 |